Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015920707.1_cds_XP_016469783.1_62297
CDS Infomation

[gene=LOC107792106] [db_xref=GeneID:107792106] [protein=transcription factor TGA2-like] [protein_id=XP_016469783.1] [location=join(37591..37724,37835..37923,38241..38326,38522..38755,39439..39483,39589..39648,39728..39805,39905..39953,40512..40783,41332..41553,42874..43016,43153..43240)] [gbkey=CDS]
Sequence

ATGGCAAGTCAAGGAATTGGAGAGACTGGTTTAACAAACTCAGGACCATCAAATCACCAT
AATATGCCTTATGCCGTTTTTAGGGGGCTAAATCCTGCTAGCACAATTAGCTTCATCTAT
CATTCTACTCCCAATAATCCAGAAGGAACTTTTGATTTTGGAGAGCTAGAAGAAGCTTTT
GCACTACAAGGATTTAAGATCAATAATGATGAAGCTAAAGCATCTTTATATGCAGCAACC
ACAGGGAAGCCTGCTGCAACTCTGGATATGTTTCCTTCTTGGCCTATGAGATTCCAAGAT
ACCCTAAAAGAAAACTCAAAATCAAGAGAAGAAGAGAGTAGTGAATCAGGTTCATTTTCA
AGTAGAGCTCAAGCCCATTTGGAACCAGAATCTCCTATCAGTAGAAAAGCATCCTCAGAA
CAAAATCAACTTCAGATAACACAGCAGCAGCAGCAGCTTCATCAAGAGATGTCAAGTGAT
AATAATCCAAGAACTGGAAATTTACAAACTGAATTAGCTTCCAAGCCCAACAATATGGAA
AAGAGAAAGGGTGCTGGTTCAACCTCAGAGAGGATGGCTGATCCTAAGACATTGAGACGT
TTAGCACAAAATAGAGAAGCAGCAAAGAAAAGCAGGCTAAGGAAAAAGGCTTATGTACAA
CAGTTAGAAACAAGCAGGATAAGACTTTCTCAGCTAGAGCAAGAACTTCAACGGGCTAGA
TCTCAGGGGATTTTCTTGGGAGGAGGTACTGCTGCTGGTGCCAACATCAGCTCTGGTGCT
GCACTATTTGACATGGAATACTCAAGGTGGTTGGATGATGATCACAGGCACATGTCCGAG
CTCCGAACTGCATTACAAGCACATTTATCAGATGGTGATCTTAGGTTAATAGTTGATGGA
TATATAGCTCATTACGATGAAATTTTCAGCCTGAAGGGTGTGGCAGCAAAATCTGATGTA
TTTCACTTAATTACTGGAATGTGGACAACTCCAGCTGAACGCTGCTTCCTTTGGATGGGT
GGTTTTAGGCCATCTGAACTTATCAAGATGTTGATTGGACAATTGGACCCTTTAACAGAG
CAGCAACTTATGGGAATTTACAGCCTCCAGCAATCTTCCCAACAAGCAGAGGATGCCCTT
TCCCAGGGATTGGAACAATTGCAACAATCTTTAGTTGATACTGTTGCAAGTGGTTCTATC
AATGATGGGATGCATCATATGGCTCTTGCATTAGGCAAGCTTTCCAATCTTGAAGGATTT
GTTCGTCAGGCCGATAATTTGAGGCAACAAACATTGCATCAGTTACATAGAATATTGACA
GTTAGGCAAGCAGCGCGATGTTTCTTGGTGATTGGGGAGTATTATGGTCGTTTACGAGCC
CTAAGTTCTCTATGGTTATCTCGTCCACGAGAGACACTGATCGCAGATGATACTTCTTGT
CAAACAACAACGGAGTTACAAATGGTACATTCCTCTCAGAACTACTTCTCAAATTTCTGA

Peptide Sequence

PEP ID

XP_016469783.1
PEP Infomation

PREDICTED: transcription factor TGA2-like [Nicotiana tabacum]
Sequence

MASQGIGETGLTNSGPSNHHNMPYAVFRGLNPASTISFIYHSTPNNPEGTFDFGELEEAF
ALQGFKINNDEAKASLYAATTGKPAATLDMFPSWPMRFQDTLKENSKSREEESSESGSFS
SRAQAHLEPESPISRKASSEQNQLQITQQQQQLHQEMSSDNNPRTGNLQTELASKPNNME
KRKGAGSTSERMADPKTLRRLAQNREAAKKSRLRKKAYVQQLETSRIRLSQLEQELQRAR
SQGIFLGGGTAAGANISSGAALFDMEYSRWLDDDHRHMSELRTALQAHLSDGDLRLIVDG
YIAHYDEIFSLKGVAAKSDVFHLITGMWTTPAERCFLWMGGFRPSELIKMLIGQLDPLTE
QQLMGIYSLQQSSQQAEDALSQGLEQLQQSLVDTVASGSINDGMHHMALALGKLSNLEGF
VRQADNLRQQTLHQLHRILTVRQAARCFLVIGEYYGRLRALSSLWLSRPRETLIADDTSC
QTTTELQMVHSSQNYFSNF

Transcript Sequence

Gene sequence data has not been registered.